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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7030241 chr9:100550375 T/A EFNB2 chr13:107142079-107187462:- -0.25 -5.87 7.95E-9 Box Plot
THCA rs7030241 chr9:100550375 T/A EML5 chr14:89078775-89259096:- 0.3 6.83 2.65E-11 Box Plot
THCA rs7030241 chr9:100550375 T/A EPDR1 chr7:37723446-37991543:+ 0.32 7.23 1.88E-12 Box Plot
THCA rs7030241 chr9:100550375 T/A NKX6-1 chr4:85413140-85419603:- 0.5 8.61 1.08E-16 Box Plot
THCA rs7030241 chr9:100550375 T/A PLCE1 chr10:95790569-96092580:+ 0.26 5.99 4.14E-9 Box Plot
THCA rs7030241 chr9:100550375 T/A TTC8 chr14:89290497-89347422:+ 0.24 6 3.88E-9 Box Plot
THCA rs7030256 chr9:100535203 C/G ABCC11 chr16:48200821-48281479:- 0.3 5.93 5.87E-9 Box Plot
THCA rs7030256 chr9:100535203 C/G BMPR1A chr10:88516358-88692595:+ -0.24 -6.19 1.27E-9 Box Plot
THCA rs7030256 chr9:100535203 C/G CLDN2 chrX:106143394-106174091:+ 0.27 6.17 1.48E-9 Box Plot
THCA rs7030256 chr9:100535203 C/G EFNB2 chr13:107142079-107187462:- -0.26 -6 3.84E-9 Box Plot
THCA rs7030256 chr9:100535203 C/G EML5 chr14:89078775-89259096:- 0.3 6.76 4.15E-11 Box Plot
THCA rs7030256 chr9:100535203 C/G EPDR1 chr7:37723446-37991543:+ 0.34 7.51 2.96E-13 Box Plot
THCA rs7030256 chr9:100535203 C/G GGT5 chr22:24615622-24641110:- 0.26 5.89 7.32E-9 Box Plot
THCA rs7030256 chr9:100535203 C/G LRRC42 chr1:54411750-54433841:+ -0.23 -6.05 2.96E-9 Box Plot
THCA rs7030256 chr9:100535203 C/G NKX6-1 chr4:85413140-85419603:- 0.51 8.85 1.75E-17 Box Plot